Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs13058817 chr3:53024139 C/T 1.67E-14 257 30.93 35.37 1.17 KM Plot
SARC rs13064597 chr3:42703265 G/T 1.0E-7 250 32.13 33.2 6.67 KM Plot
SARC rs13069006 chr3:52973305 G/C 2.09E-14 254 30.85 35.37 1.17 KM Plot
SARC rs13072395 chr3:52980573 T/C 1.95E-14 254 30.93 34.57 1.17 KM Plot
SARC rs13072457 chr3:53102389 G/A 0 254 31.57 31.97 2.13 KM Plot
SARC rs13072818 chr3:53074263 C/T 0 256 32.3 31.97 2.13 KM Plot
SARC rs13074524 chr3:52974184 A/G 2.18E-14 254 30.93 34.57 1.17 KM Plot
SARC rs13074716 chr3:38997469 G/A 9.89E-5 256 30.73 35.67 16.17 KM Plot
SARC rs13076033 chr3:52898427 T/C 1.88E-14 254 31.1 33.77 3.1 KM Plot
SARC rs13078834 chr3:52984770 G/T 1.95E-14 254 30.93 34.57 1.17 KM Plot
SARC rs13078962 chr3:39167458 T/C 7.64E-5 254 29.87 36.27 12.17 KM Plot
SARC rs13078971 chr3:53103645 G/C 0 253 31.42 31.97 2.13 KM Plot
SARC rs13085514 chr3:53091900 C/T 0 257 32.3 32.87 2.13 KM Plot
SARC rs13087883 chr3:38871520 C/T 4.28E-5 246 31.17 36.05 14.82 KM Plot
SARC rs13089969 chr3:52918267 T/G 0 257 31.1 33.77 2.13 KM Plot